I am writing this blog to define HANA tables and upload data to the table using python package hana_ml.
Environment
Environment is as below.
- Python: 3.7.13(Google Colaboratory)
- HANA: Cloud Edition 2022.16
Python packages and their versions.
- hana_ml: 2.13.22072200
- pandas: 1.3.5
- scikit-learn: 1.0.2
As for HANA Cloud, I activated scriptserver and created my users. Though I don't recognize other special configurations, I may miss something since our HANA Cloud was created long time before.
I didn't use HDI here to make environment simple.
Python Script
1. Install Python packages
Install python package
hana_ml, which is not pre-installed on Google Colaboratory.
As for pandas and scikit-learn, I used pre-installed ones.
!pip install hana_ml
Looking in indexes: https://pypi.org/simple, https://us-python.pkg.dev/colab-wheels/public/simple/
Collecting hana_ml
Downloading hana_ml-2.13.22072200-py3-none-any.whl (5.1 MB)
|████████████████████████████████| 5.1 MB 4.2 MB/s
Collecting hdbcli==2.13.13
Downloading hdbcli-2.13.13-cp34-abi3-manylinux1_x86_64.whl (11.6 MB)
|████████████████████████████████| 11.6 MB 15.5 MB/s
Requirement already satisfied: matplotlib in /usr/local/lib/python3.7/dist-packages (from hana_ml) (3.2.2)
Collecting Deprecated
Downloading Deprecated-1.2.13-py2.py3-none-any.whl (9.6 kB)
Requirement already satisfied: pandas>=0.24.2 in /usr/local/lib/python3.7/dist-packages (from hana_ml) (1.3.5)
Requirement already satisfied: tqdm>=4.43.0 in /usr/local/lib/python3.7/dist-packages (from hana_ml) (4.64.0)
Requirement already satisfied: numpy>=1.16.4 in /usr/local/lib/python3.7/dist-packages (from hana_ml) (1.21.6)
Requirement already satisfied: pydot in /usr/local/lib/python3.7/dist-packages (from hana_ml) (1.3.0)
Collecting schedule
Downloading schedule-1.1.0-py2.py3-none-any.whl (10 kB)
Collecting htmlmin>=0.1.12
Downloading htmlmin-0.1.12.tar.gz (19 kB)
Requirement already satisfied: python-dateutil>=2.7.3 in /usr/local/lib/python3.7/dist-packages (from pandas>=0.24.2->hana_ml) (2.8.2)
Requirement already satisfied: pytz>=2017.3 in /usr/local/lib/python3.7/dist-packages (from pandas>=0.24.2->hana_ml) (2022.2.1)
Requirement already satisfied: six>=1.5 in /usr/local/lib/python3.7/dist-packages (from python-dateutil>=2.7.3->pandas>=0.24.2->hana_ml) (1.15.0)
Requirement already satisfied: wrapt<2,>=1.10 in /usr/local/lib/python3.7/dist-packages (from Deprecated->hana_ml) (1.14.1)
Requirement already satisfied: kiwisolver>=1.0.1 in /usr/local/lib/python3.7/dist-packages (from matplotlib->hana_ml) (1.4.4)
Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /usr/local/lib/python3.7/dist-packages (from matplotlib->hana_ml) (3.0.9)
Requirement already satisfied: cycler>=0.10 in /usr/local/lib/python3.7/dist-packages (from matplotlib->hana_ml) (0.11.0)
Requirement already satisfied: typing-extensions in /usr/local/lib/python3.7/dist-packages (from kiwisolver>=1.0.1->matplotlib->hana_ml) (4.1.1)
Building wheels for collected packages: htmlmin
Building wheel for htmlmin (setup.py) ... done
Created wheel for htmlmin: filename=htmlmin-0.1.12-py3-none-any.whl size=27098 sha256=b0b9363455ff5e044042f13fa8c71be26012fbcb0c79f559aeaf857e0e4c861a
Stored in directory: /root/.cache/pip/wheels/70/e1/52/5b14d250ba868768823940c3229e9950d201a26d0bd3ee8655
Successfully built htmlmin
Installing collected packages: schedule, htmlmin, hdbcli, Deprecated, hana-ml
Successfully installed Deprecated-1.2.13 hana-ml-2.13.22072200 hdbcli-2.13.13 htmlmin-0.1.12 schedule-1.1.0
2. Import modules
Import python package modules.
from hana_ml.dataframe import ConnectionContext, create_dataframe_from_pandas
import pandas as pd
from sklearn.datasets import make_classification
3. Connect to HANA Cloud
Connect to HANA Cloud and check its version.
ConnectionContext class is for connection to HANA.
HOST = '<HANA HOST NAME>'
SCHEMA = USER = '<USER NAME>'
PASS = '<PASSWORD>'
conn = ConnectionContext(address=HOST, port=443, user=USER,
password=PASS, schema=SCHEMA,
encrypt=True, sslValidateCertificate=False)
print(conn.hana_version())
4.00.000.00.1660640318 (fa/CE2022.16)
4. Create test data
Create test data using scikit-learn.
There are 3 features and 1 target variable.
def make_df():
X, y = make_classification(n_samples=1000,
n_features=3, n_redundant=0)
df = pd.DataFrame(X, columns=['X1', 'X2', 'X3'])
df['CLASS'] = y
return df
df = make_df()
print(df)
df.info()
Here is dataframe overview.
X1 X2 X3 CLASS
0 0.964229 1.995667 0.244143 1
1 -1.358062 -0.254956 0.502890 0
2 1.732057 0.261251 -2.214177 1
3 -1.519878 1.023710 -0.262691 0
4 4.020262 1.381454 -1.582143 1
.. ... ... ... ...
995 -0.247950 0.500666 -0.219276 1
996 -1.918810 0.183850 -1.448264 0
997 -0.605083 -0.491902 1.889303 0
998 -0.742692 0.265878 -0.792163 0
999 2.189423 0.742682 -2.075825 1
[1000 rows x 4 columns]
<class 'pandas.core.frame.DataFrame'>
RangeIndex: 1000 entries, 0 to 999
Data columns (total 4 columns):
# Column Non-Null Count Dtype
--- ------ -------------- -----
0 X1 1000 non-null float64
1 X2 1000 non-null float64
2 X3 1000 non-null float64
3 CLASS 1000 non-null int64
dtypes: float64(3), int64(1)
memory usage: 31.4 KB
5. define table and upload data
Define HANA Table and upload data using function
"create_dataframe_from_pandas".
The function is very useful, since it automatically define table and upload at the same time. Please check options for further detail.
TRAIN_TABLE = 'PAL_TRAIN'
dfh = create_dataframe_from_pandas(conn, df, TRAIN_TABLE,
schema=SCHEMA,
force=True, # True: truncate and insert
replace=True) # True: Null is replaced by 0
6. Check upload result
check the result of HANA table definition and upload result. With
HANA dataframe, python has connection to HANA table, so need to collect when getting data.
def show_hana_df(dfh):
print(dfh.collect())
print(f'Table Structure: {dfh.get_table_structure()}')
print(dfh.describe().collect())
show_hana_df(dfh)
X1 X2 X3 CLASS
0 0.964229 1.995667 0.244143 1
1 -1.358062 -0.254956 0.502890 0
2 1.732057 0.261251 -2.214177 1
3 -1.519878 1.023710 -0.262691 0
4 4.020262 1.381454 -1.582143 1
.. ... ... ... ...
995 -0.247950 0.500666 -0.219276 1
996 -1.918810 0.183850 -1.448264 0
997 -0.605083 -0.491902 1.889303 0
998 -0.742692 0.265878 -0.792163 0
999 2.189423 0.742682 -2.075825 1
[1000 rows x 4 columns]
Table Structure: {'X1': 'DOUBLE', 'X2': 'DOUBLE', 'X3': 'DOUBLE', 'CLASS': 'INT'}
column count unique nulls mean std min max \
0 X1 1000 1000 0 -0.022545 1.403956 -4.543441 4.020262
1 X2 1000 1000 0 0.006131 0.987222 -3.019512 3.926238
2 X3 1000 1000 0 -0.048433 1.322137 -3.836929 3.994644
3 CLASS 1000 2 0 0.498000 0.500246 0.000000 1.000000
median 25_percent_cont 25_percent_disc 50_percent_cont \
0 -0.197133 -1.054538 -1.056985 -0.197133
1 -0.000251 -0.648000 -0.649373 -0.000251
2 -0.224366 -1.021008 -1.021405 -0.224366
3 0.000000 0.000000 0.000000 0.000000
50_percent_disc 75_percent_cont 75_percent_disc
0 -0.197984 0.990549 0.990513
1 -0.000709 0.666021 0.665924
2 -0.229456 0.969732 0.967854
3 0.000000 1.000000 1.000000
7. Close connection
Last but not least, closing connection explicitly is preferable.
conn.close()
